` CSHLPress.com - Metagenomics microbiome
 Checkout/View Cart

Search  (type two or more letters for suggestions): Or: Advanced Search
  
  
Browse
 
Ask Us About
 
Other CSHL Web Sites
BioSupplyNet logo graphic

BioSupplyNet gives you lab protocols; tools for data retrieval, analysis, and visualization; and information about finding kits and other laboratory supplies. Read on...

CSHL Press News

Metagenomics of skin reveals insights into the human microbiome

05/23/2008

Friday, May 23, 2008 – The human body is home to a diverse range of microorganisms, estimated to outnumber human cells in a healthy adult by ten fold. The importance of characterizing human microbiota for understanding health and disease is highlighted by the recent launch of the Human Microbiome Project by the National Institutes of Health. This report, published online today in Genome Research ( www.genome.org ), describes the investigation of healthy human skin for microbiota diversity and establishes the basis for determining a core microbiome.

The Human Microbiome Project aims to characterize the microbial communities of several regions of the body, including skin, where determining the core microbiome is essential to understanding and developing new treatments for skin conditions and diseases such as acne and atopic dermatitis (eczema). In this study, researchers led by Dr. Julie Segre of the National Human Genome Research Institute have generated a diversity profile of human skin microbiota by sequencing 16S rRNA, a component of the prokaryotic ribosome, isolated from a specific region of skin. “We focused this study on the inner elbow to inform future clinical studies of the extremely common inflammatory skin disorder atopic dermatitis, which affects this area of the skin and is associated with Staphylococcus infections,” explains Segre.

The researchers find that in the healthy subjects tested, Proteobacteria (predominantly Pseudomonas and Janthinobacterium) constituted the majority of inner elbow microbiota. Furthermore, this survey indicated that a common core skin microbiome exists between these individuals. Segre adds that this finding is critical for studying disease. “Our long-term goal is to clarify the microbial contribution to a myriad of skin disorders both with known and suspected bacterial infections.“ Segre’s group also found that the microbiota of mouse skin is comparable to that of the human inner elbow, suggesting a potential model for human skin disorders related to microbiota.

Segre explains that this work has established a foundation for answering questions about microbiota and skin disease, with the potential for novel drugs and treatments. “It's not surprising that microbes play a vital role in human health and disease,” says Segre. “Unfortunately the public is conditioned to view microbes antagonistically, when in fact they may hold the key to a whole new array of therapeutic options.”

Scientists from the National Human Genome Research Institute (Bethesda, MD) and the National Cancer Institute (Bethesda, MD) contributed to this study.

This work was supported by the National Institute of General Medical Sciences, the National Human Genome Research Institute, and the National Cancer Institute.

Media contacts:
Julie Segre, Ph.D. ( jsegre@nhgri.nih.gov; +1-301-402-2314) has agreed to be contacted for more information. Co-author Maria Turner, M.D. (mlturner@mail.nih.gov; +1-301-496-7737), is available for information regarding the dermatologic importance of this study.

Interested reporters may obtain copies of the manuscript from Peggy Calicchia, Editorial Secretary, Genome Research (calicchi@cshl.edu; +1-516-422-4012).

About the article:
The manuscript will be published online ahead of print on May 23, 2008. Its full citation is as follows:
Grice, E.A., Kong, H.H., Renaud, G., Young, A.C., NISC Comparative Sequencing Program, Bouffard, G.G., Blakesley, R.W., Wolfsberg, T.G., Turner, M.L., and Segre, J.A. A diversity profile of the human skin microbiota. Genome Res. doi:10.1101/gr.075549.107 .

About Genome Research:
Genome Research ( www.genome.org ) is an international, continuously published, peer-reviewed journal published by Cold Spring Harbor Laboratory Press. Launched in 1995, it is one of the five most highly cited primary research journals in genetics and genomics.

About Cold Spring Harbor Laboratory Press:
Cold Spring Harbor Laboratory Press is an internationally renowned publisher of books, journals, and electronic media, located on Long Island, New York. It is a division of Cold Spring Harbor Laboratory, an innovator in life science research and the education of scientists, students, and the public. For more information, visit www.cshlpress.com .

Genome Research issues press releases to highlight significant research studies that are published in the journal.



Return to CSHL Press News index
CSH Symposia Archive Our Books on the Blogosphere GrrlScientist on Experimental Heart
Photographer Timothy Archibald on My Heart vs. The Real WOrld
The hottest jobs in science, and how to land them
Adaptationomics
New Evolution Textbook Podcasts
Georgina Ferry on Max Perutz and The Secret of Life
Editor’s Select -- Free Articles From the Current Issues of our Journals
CSH Perspectives

Cold Spring Harbor Perspectives

Defining left and right in developing embryos — the view from Nobutaka Hirokawa’s laboratory.
Nobutaka Hirokawa et al.

CSH Protocols logo art

Cold Spring Harbor Protocols

Genes and Development cover

Genes & Development

Switching of the core transcription machinery during myogenesis.
Maria Divina E. Deato and Robert Tjian
Vol. 21 (17) 2137–2149.

A tDNA establishes cohesion of a neighboring silent chromatin domain.
Rudra N. Dubey and Marc R. Gartenberg
Vol. 21 (17) 2150–2160.

Gennome Research cover

Genome Research

Learning and Memory cover

Learning & Memory

Hippocampal differentiation without recognition: An fMRI analysis of the contextual cueing task.
Anthony J. Greene, William L. Gross, Catherine L. Elsinger, and Stephen M. Rao
Vol. 14 (8) 548–553.

RNA cover

RNA

Elongation factor G stabilizes the hybrid-state conformation of the 70S ribosome.
P. Clint Spiegel, Dmitri N. Ermolenko, and Harry F. Noller
Vol. 13 (9) 1473–1482.